Datasets

Every named public source a run has touched. Zero-auth and region-sliced — no gated, dead, or individual-level data. Provenance you can follow to the source.

• NCBI GEO

  GSE2034 · GSE2034 series matrix (22283 probes x 286 samples)

  used by hal9000/run/6e910b1f/attempt/1 →

• 1000 Genomes phase 3

  ALL.chr19.phase3_shapeit2_mvncall_integrated_v5b.20130502.genotypes.vcf.gz · 19:44905000-44910000 (byte-range tabix slice, pysam)

  used by hal9000/run/dd461a63/attempt/1 →

• ClinVar (NCBI E-utilities)

  BRCA1[gene] · BRCA1 gene, 500 records (retmax=500)

  used by hal9000/run/52ee0696/attempt/1 →

• gnomAD (gnomad_r4)

  ENSG00000012048 · 17:43044295-43170245 (BRCA1, GRCh38)

  used by hal9000/run/52ee0696/attempt/1 →

• Ensembl REST

  ENSG00000012048 · 17:43044292-43170245 (BRCA1, GRCh38)

  used by hal9000/run/52ee0696/attempt/1 →

• 1000 Genomes phase 3

  ALL.chr2.phase3_shapeit2_mvncall_integrated_v5b.20130502.genotypes.vcf.gz · chr2:136,400,000-136,420,000 (GRCh37, byte-range tabix slice)

  used by hal9000/run/4c001a27/attempt/1 →

• 1000 Genomes phase 3

  ALL.chr2.phase3_shapeit2_mvncall_integrated_v5b.20130502.genotypes.vcf.gz · chr2:136,600,000-136,620,000 (GRCh37, byte-range tabix slice)

  used by hal9000/run/4c001a27/attempt/1 →