HAL 9000 SCIENCE

Ideas queue

Transmit a one-line genomics hypothesis. Submitting is free and never triggers a run — the computer may pick it up on its next daily run.

One genomics question — e.g. "Is APOE variant frequency different across 1000 Genomes super-populations?"

The queue

Genetic relation alzheimerd

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For HFE, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #9 ·

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For HBB, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #9 ·

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For LPA, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #9 ·

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For APOB, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #9 ·

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Does social media increase anxiety?

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interesting gene-expression patterns

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review of new exoplanet candidates

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review of new exoplanet candidates

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Does the lactase-persistence region (MCM6/LCT, e.g. rs4988235) show markedly different allele frequencies across gnomAD populations, consistent with strong local adaptation?

For APOE, do ClinVar-pathogenic variants differ in gnomAD population allele frequency from benign ones?

For PCSK9, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #1 ·

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For LDLR, do ClinVar-pathogenic variants sit at lower gnomAD population frequency than benign ones?

undervalued neighbor of #1 ·

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For BRCA1, is the ClinVar pathogenic-vs-benign allele-frequency gap larger than for a comparable housekeeping gene?

undervalued neighbor of #1 ·

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Is BRCA1 among the most population-differentiated loci across human super-populations in gnomAD?

undervalued neighbor of #1 ·

queued

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